I am just writing something to share what I encountered last night, which is the IRIS 2024.3 does not comes with Python by default any more!!!
Which means that I need to install it by myself!!😅 The pros is, I can select my python version😁🤭💃 The trouble is.... at the first place.... I don't know what I should do😥. By going through the community (I am much more prefer than the official document, sorry InterSystems document team😓 ), I found the following piece
https://docs.intersystems.com/iris20242/csp/docbook/DocBook.UI.Page.cls?...
Hi, InterSystems document team good job!!! I love examples!!!😊
Let's go through it together!!!
1. Download Python from https://www.python.org/downloads/
OK, Let's try Python 3.12
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2. Launch the Python installer.
3.Click Customize Installation.
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4. Click Next until you reach the Advanced Options screen.
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5. Select the option to Install Python for All Users.
I must say this step is very important😱, because I didn't check it in my 1st installation and seems causing the embedded python not working🤐
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6. Click Install.
OK... seems that's all for the Python installation part😁 Let's check the path to see what is installed😀
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Ok, let's move on to the Management Portal of the IRIS side😉
7. In the InterSystems IRIS Management Portal, go to System Administration > Configuration > Additional Settings > Advanced Memory.
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8. On the Advanced Memory Settings page, in the PythonRuntimeLibrary row, click Edit.
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9. Enter C:\Program Files\Python312\python3.dll.
"Don't double quote the path!!! Don't double quote the path!!! Don't double quote the path!!! ", this is what I found failure when I follow the "Example on Windows" and put a double quote around the path....😭😭😭. The instruction is so misleading😭😭😭
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10. Click Save.
11. On the Advanced Memory Settings page, in the PythonRuntimeLibraryVersion row, click Edit.
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12. Enter 3.12.
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13. Click Save.
Seems, the setting is ready😀 Let's move on to the terminal for the final verification 😊
14. From Terminal, launch Embedded Python and verify that sys.path now includes the Python 3.11 package directories.
do ##class(%SYS.Python).Shell()
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import sys
sys.path
quit()
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15. From Terminal, use the GetPythonInfo() method of the %SYS.PythonOpens in a new tab class to view the Python version information.
do ##class(%SYS.Python).GetPythonInfo(.info)
zw info
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Looks good 😀 Let's test my code
I have written a utility class for generation dummy data in JSON, it seems stupid... 🤦♀️ but please forgive me I am still a beginner to python🤐
In my class, I try to have a mix the usage between object scripts and python😁😁
Come on, practice practice and practice😆
Class Demo.utli.datagen Extends %RegisteredObject
{
ClassMethod obsGen() As %String [ Language = python ]
{
#w ##class(Demo.utli.datagen).obsGen()
import json
#C:\InterSystems\IRISHealth\bin> .\irispip.exe install --target C:\InterSystems\IRISHealth\mgr\python\ iris
#python -m pip install --target C:\InterSystems\IRISHealth\mgr\python\ iris
import iris
#Blood pressure: between 90/60 mmHg and 120/80 mmHg
#Breathing: 12 to 18 breaths per minute
#Pulse: 60 to 100 beats per minute
#Temperature: 97.8°F to 99.1°F (36.5°C to 37.3°C)
##gen bpsys
ranvalue=iris.cls("Demo.utli.datagen").resultValueGen("80-120")
#print(ranvalue)
ranvaluelist=ranvalue.split(',')
bpsys=ranvaluelist[0]
##gen bpdia
ranvalue=iris.cls("Demo.utli.datagen").resultValueGen("60-90")
#print(ranvalue)
ranvaluelist=ranvalue.split(',')
bpdia=ranvaluelist[0]
obs={'bpsys':bpsys,'bpdia':bpdia}
#print(obs)
return json.dumps(obs)
}
ClassMethod forTest() As %String [ Language = objectscript ]
{
set a={}.%FromJSON(..obsGen())
w a,!
w "bpsys is "_a.bpsys_", bpdia is "_a.bpdia,!
set b=a.%ToJSON()
w b,!
set iter = a.%GetIterator()
while iter.%GetNext(.key , .value )
{
write !, ?5, "Key: ", key, ", Value: ", value, " type: ", a.%GetTypeOf(key)_" with value "_a.%Get(key)
}
w !
return 1
}
ClassMethod labresultGen1() As %String [ Language = python ]
{
#w ##class(Demo.utli.datagen).labresultGen1()
import json
import datetime
#python -m pip install --target C:\InterSystems\IRISHealth\mgr\python\ iris
import iris
# init result
initstr='{"labresults": [{"LabOrderNumber": "Lab24100001", "ItemNumber": "1", "ItemCode": "6690-2", "ItemCodeSystem": "LN", "ItemDesc": "Wbc", "ItemStatus": "F", "Value": "7.0", "Unit": "/nl", "RefRange": "3.8-11.0", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.552090", "UpdatedAt": "2024-10-21 16:49:01.552090"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "2", "ItemCode": "770-8", "ItemCodeSystem": "LN", "ItemDesc": "Neutros", "ItemStatus": "F", "Value": "68", "Unit": "%", "RefRange": "40-82", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.552090", "UpdatedAt": "2024-10-21 16:49:01.552090"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "3", "ItemCode": "736-9", "ItemCodeSystem": "LN", "ItemDesc": "Lymphs", "ItemStatus": "F", "Value": "20", "Unit": "%", "RefRange": "11-47", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.552090", "UpdatedAt": "2024-10-21 16:49:01.552090"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "4", "ItemCode": "5905-5", "ItemCodeSystem": "LN", "ItemDesc": "Monos", "ItemStatus": "F", "Value": "16", "Unit": "%", "RefRange": "4-15", "Abnormal": "H", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.552090", "UpdatedAt": "2024-10-21 16:49:01.552090"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "5", "ItemCode": "713-8", "ItemCodeSystem": "LN", "ItemDesc": "Eos", "ItemStatus": "F", "Value": "3", "Unit": "%", "RefRange": "0-8", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553096", "UpdatedAt": "2024-10-21 16:49:01.553096"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "6", "ItemCode": "706-2", "ItemCodeSystem": "LN", "ItemDesc": "Baso", "ItemStatus": "F", "Value": "0", "Unit": "%", "RefRange": "0-1", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553160", "UpdatedAt": "2024-10-21 16:49:01.553160"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "7", "ItemCode": "38518-7", "ItemCodeSystem": "LN", "ItemDesc": "Imm Gran", "ItemStatus": "F", "Value": "0", "Unit": "%", "RefRange": "0-2", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553160", "UpdatedAt": "2024-10-21 16:49:01.553160"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "8", "ItemCode": "789-8", "ItemCodeSystem": "LN", "ItemDesc": "Rbc", "ItemStatus": "F", "Value": "4.02", "Unit": "/pl", "RefRange": "4.07-4.92", "Abnormal": "L", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553296", "UpdatedAt": "2024-10-21 16:49:01.553296"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "9", "ItemCode": "718-7", "ItemCodeSystem": "LN", "ItemDesc": "Hgb", "ItemStatus": "F", "Value": "13.7", "Unit": "g/dl", "RefRange": "12.0-14.1", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553296", "UpdatedAt": "2024-10-21 16:49:01.553296"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "10", "ItemCode": "4544-3", "ItemCodeSystem": "LN", "ItemDesc": "Hct", "ItemStatus": "F", "Value": "40", "Unit": "%", "RefRange": "34-43", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553296", "UpdatedAt": "2024-10-21 16:49:01.553296"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "11", "ItemCode": "787-2", "ItemCodeSystem": "LN", "ItemDesc": "Mcv", "ItemStatus": "F", "Value": "80", "Unit": "fl", "RefRange": "77-98", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553296", "UpdatedAt": "2024-10-21 16:49:01.553296"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "12", "ItemCode": "mch", "ItemDesc": "Mch", "ItemStatus": "F", "Value": "30", "Unit": "pg", "RefRange": "27-35", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553296", "UpdatedAt": "2024-10-21 16:49:01.553296"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "13", "ItemCode": "mchc", "ItemDesc": "Mchc", "ItemStatus": "F", "Value": "32", "Unit": "g/dl", "RefRange": "32-35", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553296", "UpdatedAt": "2024-10-21 16:49:01.553296"}, {"LabOrderNumber": "Lab24100001", "ItemNumber": "14", "ItemCode": "plt", "ItemDesc": "Platelets", "ItemStatus": "F", "Value": "221", "Unit": "/nl", "RefRange": "140-400", "InputBy": "12", "InputOrg": "lab", "InputDateTime": "2024-10-21 16:49:01.553296", "UpdatedAt": "2024-10-21 16:49:01.553296"}]}'
#print(initstr)
# convert to dict
initstrdic=json.loads(initstr)
#print(initstrdic)
# loop through the reslut
labresults=initstrdic["labresults"]
for result in labresults:
# update the result
x=datetime.datetime.now()
result.update({"InputDateTime":x.strftime("%Y-%m-%d %H:%M:%S.%f")})
result.update({"UpdatedAt":x.strftime("%Y-%m-%d %H:%M:%S.%f")})
#print(result["RefRange"])
ranvalue=iris.cls("Demo.utli.datagen").resultValueGen(result["RefRange"])
#print(ranvalue)
ranvaluelist=ranvalue.split(',')
result.update({"Value":ranvaluelist[0]})
result.update({"Abnormal":ranvaluelist[1]})
#print(result)
#print(labresults)
# put the lab result list into dict
labresultsdict={"labresults":labresults}
return json.dumps(labresultsdict)
}
ClassMethod resultValueGen(range = "0-1") As %String [ Language = python ]
{
import random
#w ##class(Demo.utli.datagen).resultValueGen()
# expecting the range is numeric which look like "3-17" with a dash seperator
list1=range.split('-')
lowerbound=int(float(list1[0]))
uppderbound=int(float(list1[1]))
#print(lowerbound)
#print(uppderbound)
if uppderbound==1:
ranvalue=random.randrange(0, 2)
else:
a=lowerbound-2
if a<0:
a=0
b=uppderbound+2
ranvalue=random.randrange(a, b)
rtstr=str(ranvalue)+','
if ranvalue<lowerbound:
rtstr=str(ranvalue)+',L'
if ranvalue>uppderbound:
rtstr=str(ranvalue)+',H'
return rtstr
}
}
OK let's test it on the terminal
1st Change to my namespace
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2nd run the code
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looks good😉, let's try another piece
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😁 seems not bad, let's try the final piece
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seems working 😊
Thank you for reading😚
